PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G245400.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 342aa    MW: 37576.7 Da    PI: 5.8892
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G245400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.62.5e-0961110154
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL  +++ +k+L
  Aqcoe6G245400.1.p  61 RKVQKADREKLRRDRLNEQFLELGNALDPD----RPKNDKATILADTIQMLKDL 110
                        5677889********************997....79****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.91360110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.29E-861114No hitNo description
PfamPF000104.6E-761110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-1261133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-1361130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-666116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MDQWKPEGGG FCHPSISIQG DLADVAALTD YCQPQPPSLN GSHPESSQRT EVEVKDPIAA  60
RKVQKADREK LRRDRLNEQF LELGNALDPD RPKNDKATIL ADTIQMLKDL TSQVNRLKAE  120
YATLSEESRE LTQEKNELRE EKASIKSDID NLNVQYQQRL RVMFPWSAMD PAVMMGPPSY  180
PFAMPVPVPT APIPMHPSMQ PFPFFPSQNP GAIPNPCSTF IPYSAPGNPQ MERPCTYYAS  240
PHQQASSRSH TLSKQDHKSK SSDPHKGSHT EGNVGSNDVA TDLELKTPGS TAEQELSSEE  300
RKEKQSQKQT SAAEQSCSSR CSSQGLQDSS SSSVGGPKVN N*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261279.11e-148PREDICTED: transcription factor bHLH121
SwissprotQ9LT233e-78BH121_ARATH; Transcription factor bHLH121
TrEMBLM5WH391e-129M5WH39_PRUPE; Uncharacterized protein
STRINGVIT_04s0023g03430.t011e-120(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.14e-67bHLH family protein